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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015803787.1_cds_XP_016486034.1_7657
CDS Infomation

[gene=LOC107806399] [db_xref=GeneID:107806399] [protein=aspartic proteinase CDR1-like] [protein_id=XP_016486034.1] [location=complement(24969..26336)] [gbkey=CDS]
Sequence

ATGAAGATGAATACTAAAGCTATTACTCTCTTTTCTACATTAGTCTTTTTAGCTTTCTTT
CACCTTTCTTTGGTTTCTTGTCGCAAAATAATAAGCCATCGTGGTGAAAATGGTTTCACT
CTTGATCTTATCCACCGCGATTCTCCTCTTTCGCCTTTCTACAACCCATCAAACACTCCA
TCAAAGCGCCTTAGAAACGCCTTCCACCGCTCATTTTCACGGGCATCTTTCTTCAAGAAA
AGTTCCTTTGCTAGTGCTAATGACACAATCCAATCTGATATTGAACCAATCCCAGGGGAA
TACCTTATGAAAATCTCTATTGGAACTCCACCAGTTGAAATTGTAGCCATAGCTGACACT
GGTAGTGATTTAACATGGACACAATGTATGCCTTGCGCTAATTGTTTCCAACAAACAACC
CCTATTTTTGATTCCAAACAAAGCTCTACTTATAAAACTGTGGGGTGTAACGCTGAAGAA
TGTACATCACTAGGGACTTCTTCTTGTGTGAGAGGAAATATTTGTGAATATCAAATGAGT
TATGGTGACCAATCACAAACTATTGGTGATCTTGCTTTTGACAAATTTACATTTCCTTCT
ACTTCTGGAAATAATGTTTCTATTCCTAATGTTGTGTTTGGTTGTGGTCACGACAATAGT
GGCACATTCAATAACTATACTTCTGGTATCGTTGGCTTAGGTGGTGGTGAAGTCTCAATC
ATTAACCAATTGGATAAACAAATCAAAGGGAAATTCTCTTATTGTTTAATCCCAATTCCT
TTACAATCATCTATTTCCAATGCCACAAGTCACATCAACTTTGGTGATAGTGCTACCGTG
TCTGGCCCTAACGTTATTTCAACTCCCTTGATTAAAAAGGAACCGTCTACGTTCTACTAT
CTAAATTTGAAAGGTATTAGCGTTGGAGATAAGATAGTGGATTTCAAATCTCCTAATATT
ACTTCTTCTGCTGCTGGTGATGATGGTCTAGGAAACATTATAATTGATTCTGGTACAACA
TTAACGTTGTTGCCTAGTGAATTTTACTCGAGTTTGGAATCAACATTAGTAGATTCGATC
AATGCTACTAGGTGGGATGACCCTTCGGGCACTTTTGGTCTCTGTTACGAGTCTGAGAAT
GGTACTATCGATGCTCCCAAAATTGTCGCACATTTTACAGATGCAGATTTAGAGTTGTCA
CCTTCGACCACGTTTGCAGAAGTGGAGGAAGGTTTTGTTTGTCTTACAATAGTGCCAGTA
GAGGAAGTTGCTATTTTTGGAAACTTGGCTCAGGCGAATTTCTTAATTGGATATGATCTT
GTGGCCAATAGAGTCTCCTTCCAGCCTACAGATTGTACTAAGTACTAA

Peptide Sequence

PEP ID

XP_016486034.1
PEP Infomation

PREDICTED: aspartic proteinase CDR1-like [Nicotiana tabacum]
Sequence

MKMNTKAITLFSTLVFLAFFHLSLVSCRKIISHRGENGFTLDLIHRDSPLSPFYNPSNTP
SKRLRNAFHRSFSRASFFKKSSFASANDTIQSDIEPIPGEYLMKISIGTPPVEIVAIADT
GSDLTWTQCMPCANCFQQTTPIFDSKQSSTYKTVGCNAEECTSLGTSSCVRGNICEYQMS
YGDQSQTIGDLAFDKFTFPSTSGNNVSIPNVVFGCGHDNSGTFNNYTSGIVGLGGGEVSI
INQLDKQIKGKFSYCLIPIPLQSSISNATSHINFGDSATVSGPNVISTPLIKKEPSTFYY
LNLKGISVGDKIVDFKSPNITSSAAGDDGLGNIIIDSGTTLTLLPSEFYSSLESTLVDSI
NATRWDDPSGTFGLCYESENGTIDAPKIVAHFTDADLELSPSTTFAEVEEGFVCLTIVPV
EEVAIFGNLAQANFLIGYDLVANRVSFQPTDCTKY

Transcript Sequence

Gene sequence data has not been registered.